Link to Genecards: | STRN | ALK |
Link |
---|
STRN--ALK |
ChimerKB | Top |
Fusion_pair | 5'Gene Junction (Chr/Position/Strand) | 3'Gene Junction (Chr/Position/Strand) | Breakpoint_Type | Genome_Build | Disease | Validation | PMID | Gene Type | Source |
---|---|---|---|---|---|---|---|---|---|
STRN_ALK | -/421/ | -/4080/ | Exonic | hg19 | - | - | - | Oncogene; | Cosmic_recurrent |
STRN_ALK | -/421+2363/ | -/4080-440/ | Exonic | hg19 | - | - | - | Oncogene; | Cosmic_recurrent |
STRN_ALK | -/421+2483/ | -/4080-580/ | Exonic | hg19 | - | - | - | Oncogene; | Cosmic_recurrent |
STRN_ALK | -/421+6813/ | -/4080-1756/ | Exonic | hg19 | - | - | - | Oncogene; | Cosmic_recurrent |
STRN_ALK | -/-/ | -/-/ | - | hg19 | lung adenocarcinoma | - | 23661334 | Oncogene; | Cosmic_nonrecurrent |
STRN_ALK | -/-/ | -/-/ | - | hg19 | thyroid carcinoma | - | 24475247 | Oncogene; | Cosmic_nonrecurrent |
STRN_ALK | -/-/ | -/-/ | - | hg19 | thyroid cancer | - | 24613930 | Oncogene; | Cosmic_nonrecurrent |
ChimerPUB | Top |
Fusion_pair | Translocation | PMID | Disease | Validation | Gene Type | Sentence_highlight |
---|---|---|---|---|---|---|
STRN_ALK | - | 25527510 | papillary carcinoma;thyloid cancer | FISH | - | Two rearrangements of ALK were striatin (STRN)-ALK fusions, which were identified by 5' RACE analysis. |
STRN_ALK | - | 24706668 | thyloid cancer | - | - | The STRN-ALK fusion gene promotes thyroid cell transformation and dependency on ALK signaling. /// STRN-ALK Is a Potential Therapeutic Target in Aggressive Thyroid Cancer.. |
STRN_ALK | - | 24475247 | thyroid carcinoma | PCR;RT-PCR | - | The STRN/ALK transcript consisted of the fusion between exon 3 of STRN and exon 20 of ALK. /// "High resolution array-comparative genomic hybridization data complemented by RT-PCR and sequencing analyses, allowed us to demonstrate the presence of a STRN/ALK fusion. " /// Identification of a recurrent STRN/ALK fusion in thyroid carcinomas.. |
STRN_ALK | - | 24613930 | thyloid cancer | - | - | STRN-ALK leads to constitutive activation of ALK kinase via dimerization mediated by the coiled-coil domain of STRN and to a kinase-dependent, thyroid-stimulating hormone-independent proliferation of thyroid cells. /// "Moreover, expression of STRN-ALK transforms cells in vitro and induces tumor formation in nude mice. " /// The kinase activity of STRN-ALK and the ALK-induced cell growth can be blocked by the ALK inhibitors crizotinib and TAE684. /// "In addition to well-differentiated papillary cancer, STRN-ALK was found with a higher prevalence in poorly differentiated and anaplastic thyroid cancers, and it did not overlap with other known driver mutations in these tumors. " /// Identification of the transforming STRN-ALK fusion as a potential therapeutic target in the aggressive forms of thyroid cancer.. /// Our data demonstrate that STRN-ALK fusion occurs in a subset of patients with highly aggressive types of thyroid cancer and provide initial evidence suggesting that it may represent a therapeutic target for these patients. |
STRN_ALK | - | 26848800 | renal cell carcinoma;sickle cell trait | ISH | - | Two Cases of Renal Cell Carcinoma Harboring a Novel STRN-ALK Fusion Gene.. /// "ALK translocation was confirmed by fluorescent in situ hybridization, and further gene analysis revealed a STRN-ALK fusion. " /// "Here, we describe 2 cases of RCC harboring a novel striatin (STRN)-ALK fusion. " |
ChimerSEQ | Top |
Fusion_pair | 5'Gene Junction (Chr/Position/Strand) | 3'Gene Junction (Chr/Position/Strand) | 5'Gene_locus | 3'Gene_locus | Breakpoint_Type | Genome_Build | Frame | Chr_info | Cancertype_or_disease | BarcodeID | Gene Type | Source |
---|---|---|---|---|---|---|---|---|---|---|---|---|
STRN_ALK | chr2/37143221/- | chr2/29446394/- | 2p22.2 | 2p23.2 | Exonic | hg19 | In-frame | Intra-chr | THCA | TCGA-DJ-A3US-01A | Oncogene; | PRADA |
ChiTaRS 2.1 | Top |
FARE-CAFE | Top |
TicDB | Top |
TUMOR FUSION Gene Data Portal | Top |
Cancer | TCGA_barcode | FusionPair | Evalue | 5'Gene_Junction | 3'Gene_Junction | Tier | Frame | TN | WGS_validation |
---|---|---|---|---|---|---|---|---|---|
THCA | DJ-A3US-01A | STRN__ALK | 0.52 | 2:37143221/-1 | 2:29446394/-1 | tier1 | In-frame | 17107 | validated |
KIRP | G7-6792-01A | STRN__ALK | 0.52 | 2:37143221/-1 | 2:29446394/-1 | tier1 | In-frame | 17108 | NA |
FusionCancer | Top |
ConjoinG | Top |
1000Genome | Top |
18Cancers | Top |
Bodymap2 | Top |
HPA | Top |
Non_Tumor_Cells | Top |
Babiceanu_Dataset | Top |
Banned_Dataset | Top |
Known_Fusions | Top |
ONGene Database | Top |
Bushman Cancer Gene Database | Top |
Tumor Gene Set By Uniprot | Top |
Oesophagus_Dataset | Top |
Gliomas_Dataset | Top |
Prostate_Dataset | Top |
Pancreases_Dataset | Top |
GTEx | Top |
Klijin_Dataset | Top |
Fimereli_Dataset | Top |
Literature | Top |
Cortex_Dataset | Top |
ChromothripsisDB | Top |