Link to Genecards: | NTRK1 | TPM3 |
ChimerKB | Top |
Fusion_pair | 5'Gene Junction (Chr/Position/Strand) | 3'Gene Junction (Chr/Position/Strand) | Breakpoint_Type | Genome_Build | Disease | Validation | PMID | Gene Type | Source |
---|---|---|---|---|---|---|---|---|---|
NTRK1_TPM3 | -/1261/ | -/718/ | Exonic | hg19 | - | - | - | - | Cosmic_recurrent |
NTRK1_TPM3 | -/1261+445/ | -/718-3315/ | Exonic | hg19 | - | - | - | - | Cosmic_recurrent |
NTRK1_TPM3 | -/1261+393/ | -/718-2796/ | Exonic | hg19 | - | - | - | - | Cosmic_recurrent |
NTRK1_TPM3 | -/-/ | -/-/ | - | hg19 | papillary thyroid carcinoma | - | 10074915 | - | Cosmic_nonrecurrent |
NTRK1_TPM3 | -/-/ | -/-/ | - | hg19 | papillary thyroid carcinoma | - | 7590742 | - | Cosmic_nonrecurrent |
ChimerPUB | Top |
ChimerSEQ | Top |
ChiTaRS 2.1 | Top |
FARE-CAFE | Top |
Fusion_Protein | Cancer_Type | FP_Experimental_Method | FP_Karyotype | FP_Reference |
---|---|---|---|---|
NTRK1-TPM3 | Papillary thyroid carcinoma | PCR,DNA sequencing,Southern blot | _ | PubMed: 8288244 |
Fusion_Protein | Fusion_Protein_Isoforms | 5'_Protein | F_B_P | FBP_in_Exon/Intron | 5'_Protein_on_Positive/Negative_Strands | 3'_Protein | S_B_P | 3'_Protein_on_Positive/Negative_Strands | SBP_in_Exon/Intron | Fusion_Protein_mRNA_sequence | Fusion_Protein_Reference | Fusion_Protein_GenbankID |
---|---|---|---|---|---|---|---|---|---|---|---|---|
NTRK1-TPM3 | NTRK1-TPM3 | NTRK1 | _ | _ | 1 | TPM3 | _ | 0 | _ | _ | _ | _ |
Fusion_Protein | miRNAs_Targets_Fusion_protein | Missing_MiRNAs_Targets_Fusion_protein | FP_miRNA_Validation_method |
---|---|---|---|
NTRK1-TPM3 | hsa-miR-1, hsa-miR-16-5p, hsa-miR-145-5p, hsa-miR-26b-5p, hsa-miR-615-3p, hsa-miR-92a-3p | _ | Report assay,Microarray,NGS |
Fusion_Protein | 5'P_Ref_mRNA_seqID | FP_Transcription_factors | FP_Missing_TFs | FP_TF_Reference |
---|---|---|---|---|
NTRK1-TPM3 | NM_001007792.1 |
1) STAT1_HUMAN 2) RBL2_HUMAN 3) ZNF263_HUMAN 4) E2F4_HUMAN 5) PRDM14_HUMAN 6) ESTROGEN RECEPTOR ALPHA_HUMAN 7) ETS1_HUMAN 8) EGR1_HUMAN 9) CTCF_HUMAN 10) BRG1_HUMAN 11) HNF4A_HUMAN 12) TFAP2C_HUMAN 13) CTCF_HUMAN 14) ESR1_HUMAN 15) FOXP1_HUMAN 16) NR1H3_HUMAN | - |
1) 19122651 2) 20385362 3) 19887448 4) 21247883 5) 20953172 6) 20547749 7) 20019798 8) 20690147 9) 21795385 10) 19505939 11) 21646355 12) 21572391 13) 20219941 14) 21235772 15) 21924763 16) 22292898 |
TicDB | Top |
TUMOR FUSION Gene Data Portal | Top |
FusionCancer | Top |
ConjoinG | Top |
1000Genome | Top |
18Cancers | Top |
Bodymap2 | Top |
HPA | Top |
Non_Tumor_Cells | Top |
Babiceanu_Dataset | Top |
Banned_Dataset | Top |
Known_Fusions | Top |
ONGene Database | Top |
Bushman Cancer Gene Database | Top |
Tumor Gene Set By Uniprot | Top |
Oesophagus_Dataset | Top |
Gliomas_Dataset | Top |
Prostate_Dataset | Top |
Pancreases_Dataset | Top |
GTEx | Top |
Klijin_Dataset | Top |
Fimereli_Dataset | Top |
Literature | Top |
Cortex_Dataset | Top |
ChromothripsisDB | Top |