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Oncofuse is a tool designed to predict the oncogenic potential of fusion genes. It is a post-processing step that tries to validate in-silico the predictions made by fusion detection software. Goal is to assign a functional prediction score (oncogenic potential, i.e. the probability of being 'driver' events) to fusion sequences identified by other software such as Tophat-fusion, fusioncatcher or STAR. Details can be found here. This module aids in running oncofuse for you.

Upload output from fusion detection softwares such as Tophat-fusion, fusioncatcher or STAR or simply upload coordinate based input format.

Note: This module is in development phase. so you might encounter few bugs. We will soon fix this. Please report us with any bugs you encounter.

If you find this module useful, please cite the following articles.
Example files:

Upload File:

Input Type:

Genome assembly version:

Tissue Type: