Case study

  • 1. Edrgen set (27 fusion genes)
  • 2. Berger set (11 fusion genes)
  • 3. Yu set (9 fusion genes)
  • 4. Kumar-Sinha set (113 fusion genes)
  • 4. Klijn set (2199 fusion genes)

  • References

    1. Edgren, H. et al. Identification of fusion genes in breast cancer by paired-end RNA-sequencing. Genome Biology 12, R6 (2011).
    2. Berger, M. F. et al. Integrative analysis of the melanoma transcriptome. Genome Research 20, 413–427 (2010).
    3. Yu, Y. P. et al. Novel Fusion Transcripts Associate with Progressive Prostate Cancer. The American Journal of Pathology 184, 2840–2849 (2014).
    4. Kumar-Sinha C, Kalyana-Sundaram S, Chinnaiyan AM. Landscape of gene fusions in epithelial cancers: seq and ye shall find. Genome Med. BioMed Central; 2015;7: 129. doi:10.1186/s13073-015-0252-1
    5. Klijn C, Durinck S, Stawiski EW, Haverty PM, Jiang Z, Liu H, et al. A comprehensive transcriptional portrait of human cancer cell lines. Nat Biotechnol. 2015;33: 306–312. doi:10.1038/nbt.3080













































































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